Co-Publication Network
Publications
Administration of broadly neutralizing anti-HIV-1 antibodies at ART initiation maintains long-term CD8+ T cell immunity
M. Rosás-Umbert, J.D. Gunst, M.H. Pahus, R. Olesen, M. Schleimann, P.W. Denton, V. Ramos, A. Ward, N.N. Kinloch, D.C. Copertino, T. Escribà, A. Llano, Z.L. Brumme, R. Brad Jones, B. Mothe, C. Brander, J. Fox, M.C. Nussenzweig, S. Fidler, M. Caskey, M. Tolstrup, O.S. Søgaard
HIV proviral genetic diversity, compartmentalization and inferred dynamics in lung and blood during long-term suppressive antiretroviral therapy
A. Shahid, B.R. Jones, J.S.W. Yang, W. Dong, T. Shaipanich, K. Donohoe, C.J. Brumme, J.B. Joy, J.M. Leung, Z.L. Brumme
Prolonged viral suppression with anti-HIV-1 antibody therapy
C. Gaebler, L. Nogueira, E. Stoffel, T.Y. Oliveira, G. Breton, K.G. Millard, M. Turroja, A. Butler, V. Ramos, M.S. Seaman, J.D. Reeves, C.J. Petroupoulos, I. Shimeliovich, A. Gazumyan, C.S. Jiang, N. Jilg, J.F. Scheid, R. Gandhi, B.D. Walker, M.C. Sneller, A. Fauci, T.-W. Chun, M. Caskey, M.C. Nussenzweig
Early intervention with 3BNC117 and romidepsin at antiretroviral treatment initiation in people with HIV-1: a phase 1b/2a, randomized trial
J.D. Gunst, M.H. Pahus, M. Rosás-Umbert, I.-N. Lu, T. Benfield, H. Nielsen, I.S. Johansen, R. Mohey, L. Østergaard, V. Klastrup, M. Khan, M.H. Schleimann, R. Olesen, H. Støvring, P.W. Denton, N.N. Kinloch, D.C. Copertino, A.R. Ward, W.D.C. Alberto, S.D. Nielsen, M.C. Puertas, V. Ramos, J.D. Reeves, C.J. Petropoulos, J. Martinez-Picado, Z.L. Brumme, R.B. Jones, J. Fox, M. Tolstrup, M.C. Nussenzweig, M. Caskey, S. Fidler, O.S. Søgaard
Bayesian sampling of HIV-1 integration dates by root-to-tip regression
R.-C. Ferreira, E. Wong, A.F.Y. Poon
Interferon opens up: HIV-induced inflammation reconfigures 3D chromatin conformation and affects where HIV integrates
Y. Wei, Y.-C. Ho
HIV-1 replication and latency are balanced by mTOR-driven cell metabolism
J.M. Crater, D.F. Nixon, R.L. Furler O’Brien
View: Frontiers in Cellular and Infection Microbiology
Inhibition of a Chromatin and Transcription Modulator, SLTM, Increases HIV-1 Reactivation Identified by a CRISPR Inhibition Screen
Pedersen, Savannah F; Collora, Jack A; Kim, Rachel N; Yang, Kerui; Razmi, Anya; Catalano, Allison A; Yeh, Yang-Hui Jimmy; Mounzer, Karam; Tebas, Pablo; Montaner, Luis J; Ho, Ya-Chi.
No evidence that circulating HIV-specific immune responses contribute to persistent inflammation and immune activation in persons on long-term ART
Ward, Adam R; Thomas, Allison S; Stevenson, Eva M; Huang, Szu-Han; Keating, Sheila M; Gandhi, Rajesh T; McMahon, Deborah K; Bosch, Ronald J; Macatangay, Bernard J; Cyktor, Joshua C; Eron, Joseph J; Mellors, John W; Jones, R Brad; ACTG A5321 Team.
The loud minority: Transcriptionally active HIV-1-infected cells survive, proliferate, and persist
Collora, Jack A; Ho, Ya-Chi.
Inhibition of major histocompatibility complex-I antigen presentation by sarbecovirus ORF7a proteins
Zhang, Fengwen; Zang, Trinity M; Stevenson, Eva M; Lei, Xiao; Copertino, Dennis C; Mota, Talia M; Boucau, Julie; Garcia-Beltran, Wilfredo F; Jones, R Brad; Bieniasz, Paul D.
SARS CoV-2 mRNA vaccination exposes latent HIV to Nef-specific CD8+ T-cells
Stevenson, Eva M; Terry, Sandra; Copertino, Dennis; Leyre, Louise; Danesh, Ali; Weiler, Jared; Ward, Adam R; Khadka, Pragya; McNeil, Evan; Bernard, Kevin; Miller, Itzayana G; Ellsworth, Grant B; Johnston, Carrie D; Finkelsztein, Eli J; Zumbo, Paul; Betel, Doron; Dündar, Friederike; Duncan, Maggie C; Lapointe, Hope R; Speckmaier, Sarah; Moran-Garcia, Nadia; Papa, Michelle Premazzi; Nicholes, Samuel; Stover, Carissa J; Lynch, Rebecca M; Caskey, Marina; Gaebler, Christian; Chun, Tae-Wook; Bosque, Alberto; Wilkin, Timothy J; Lee, Guinevere Q; Brumme, Zabrina L; Jones, R Brad.
Potential multi-modal effects of provirus integration on HIV-1 persistence: lessons from other viruses
Linden, Noemi; Jones, R Brad.
Distinct gene expression by expanded clones of quiescent memory CD4+ T cells harboring intact latent HIV-1 proviruses
Weymar, Georg H J; Bar-On, Yotam; Oliveira, Thiago Y; Gaebler, Christian; Ramos, Victor; Hartweger, Harald; Breton, Gaëlle; Caskey, Marina; Cohn, Lillian B; Jankovic, Mila; Nussenzweig, Michel C.
Longitudinal clonal dynamics of HIV-1 latent reservoirs measured by combination quadruplex polymerase chain reaction and sequencing
Cho, Alice; Gaebler, Christian; Olveira, Thiago; Ramos, Victor; Saad, Marwa; Lorenzi, Julio C C; Gazumyan, Anna; Moir, Susan; Caskey, Marina; Chun, Tae-Wook; Nussenzweig, Michel C.
Hide and seek: for HIV-infected CD4+ T cells, playing well comes with maturity
Leyre, Louise; Jones, R Brad.
View: Journal of Clinical Investigation
Single-cell multiomics reveals persistence of HIV-1 in expanded cytotoxic T cell clones
Collora, Jack A; Liu, Runxia; Pinto-Santini, Delia; Ravindra, Neal; Ganoza, Carmela; Lama, Javier R; Alfaro, Ricardo; Chiarella, Jennifer; Spudich, Serena; Mounzer, Karam; Tebas, Pablo; Montaner, Luis J; van Dijk, David; Duerr, Ann; Ho, Ya-Chi.
Deep Sequencing Analysis of Individual HIV-1 Proviruses Reveals Frequent Asymmetric Long Terminal Repeats
Joseph, Kevin W; Halvas, Elias K; Brandt, Leah D; Patro, Sean C; Rausch, Jason W; Chopra, Abha; Mallal, Simon; Kearney, Mary F; Coffin, John M; Mellors, John W.
HIV Proviral Burden, Genetic Diversity, and Dynamics in Viremic Controllers Who Subsequently Initiated Suppressive Antiretroviral Therapy
Omondi, F Harrison; Sudderuddin, Hanwei; Shahid, Aniqa; Kinloch, Natalie N; Jones, Bradley R; Miller, Rachel L; Tsai, Olivia; MacMillan, Daniel; Trocha, Alicja; Brockman, Mark A; Brumme, Chanson J; Joy, Jeffrey B; Liang, Richard; Walker, Bruce D; Brumme, Zabrina L.
Integration features of intact latent HIV-1 in CD4+ T cell clones contribute to viral persistence
Huang, Amy S; Ramos, Victor; Oliveira, Thiago Y; Gaebler, Christian; Jankovic, Mila; Nussenzweig, Michel C; Cohn, Lillian B.